T0994 Domain 1 Parse 1 Confidence: 0.25

Job ID	Status	Method	Username	Target	Length	Date (PST)	Expiration Date (PST)
372	Complete	Structure prediction	casp	T0994	585	18 Jun 2018	-

Domain ID	Domain	Parse	Confidence	Modeling Method	Model Span	Length	Date (PST)
547	1	1	0.25	comparative modeling	1-344	344	19 Jun 2018

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   sequence: MLSSFLMLSIISSLLTICVIFLVRMLYIKYTQNIMSHKIWLLVLVSTLIPLIPFYKISNFTFSKDMMNRNVSDTTSSVSHMLDGQQSSVTKDLAINVNQFETSNITYMILLIWVFGSLLCLFYMIKAFRQIDVIKSSSLESSYLNERLKVCQSKMQFYKKHITISYSSNIDNPMVFGLVKSQIVLPTVVVETMNDKEIEYIILHELSHVKSHDLIFNQLYVVFKMIFWFNPALYISKTMMDNDCEKVCDRNVLKILNRHEHIRYGESILKCSILKSQHINNVAAQYLLGFNSNIKERVKYIALYDSMPKPNRNKRIVAYIVCSISLLIQAPLLSAHVQQDKYET
    psipred: -HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH-----------------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHH--------EEEE-------EEEE----EEE---HHH----HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH--------EEEEE---HHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHH----------------
    spider3: -HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH-----------H-HHHHHHH--------------------HHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH--------EEEEE------EEEE----EEEE-HHHHHH--HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH------HHH-----HHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHH--HHH-----------
 deepconcnf: -HHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH-------------------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHH-------EEEEE---------------EEEEEHHHH----HHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH---HHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHH----------------

View

GREMLIN (Neff(80%)/√Len: 127.8)

Alignment

>547
MLSSFLMLSIISSLLTICVIFLVRMLYIKYTQNIMSHKIWLLVLVSTLIPLIPFYKISNFTFSKDMMNRNVSDTTSSVSHMLDGQQSSVTKDLAINVNQFETSNITYMILLIWVFGSLLCLFYMIKAFRQIDVIKSSSLESSYLNERLKVCQSKMQFYKKHITISYSSNIDNPMVFGLVKSQIVLPTVVVETMNDKEIEYIILHELSHVKSHDLIFNQLYVVFKMIFWFNPALYISKTMMDNDCEKVCDRNVLKILNRHEHIRYGESILKCSILKSQHINNVAAQYLLGFNSNIKERVKYIALYDSMPKPNRNKRIVAYIVCSISLLIQAPLLSAHVQQDKYET
>4aw6A_201 weight: 0.4591 score: 197.25 eval: 2.2e-22 prob: 99.89 identity: 0.1017 startpos: 75
--TFSFWSGLYSETEGtiLLFGGIPYLWRLSGriTQSLVfatfSALAGLPWSLYNTFVIEEKHGFNQ-QT-----LG----------FFMKDAIKKfcilykIGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFtpEGKLKEEIEVMAKSIDFPL--TKVYVVesHSNAYFYGFfnKRIVLFDTLLEqcKNEEVLAVLGHELGHWKLGHTVKNIIISQMNSFLCFFLFAVLIGrvLSRRFEFQADAFAKKL-G--KAKDLYSALIKLNKDNLGfvSDWLFSMWHYSHPPLLERLQALKTM----------------------------------------
>2yptA_301 weight: 0.4438 score: 5.14 eval: n/a prob: n/a identity: 0.1047 startpos: 17
RIFGAVLLFSWTVYLWETFLAQRQRRIYKTTTHvrLYQLDKSTFSFWSGLYSETEGTLIlyLWRLSGRPEYEItlFSALAGLPWSLYNTFveEKHGFNQQTLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKifTLVVspEGKLKEEIEVMAKSIDFPLTKVYVvrSSHSNA-YFYGFKR--IVLFDTLLEqcKNEEVLAVLGHALGHWKLGHTVKNIIISQMNSFLCFFLFAVllFAalSRRFEFQADAFAKKL---GKAKDLYSALIKLNKDNLGFPVSdlFSMWHYSHPPLLERLQALKTM----------------------------------------
>4aw6A_302 weight: 0.0213 score: 5.13 eval: n/a prob: n/a identity: 0.1076 startpos: 21
AVLLFSWTVYLWETFLAQRQRRIYKtlGQIMdkSRLYQLDKSTFSFWSGLYSETEGTLIlyLWRLSGRPEYEITQSLVFLLLATLFSALAgpWSLYnnQQTLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKifTLVVspEGKLKEEIEVMAKSIDFPLTKVYVvrSSHSNA-YFYGFFkkRIVLFDTLLEqcKNEEVLAVLGHELGHWKLGHTVKNIIISQMNSFLCFFLFAVllFAAfsRRFEFQADAFAKKL---GKAKDLYSALIKLNKDngFPVSDWLFSMWHYSHPPLLERLQALKTM----------------------------------------
>4il3A_305 weight: 0.0197 score: 4.64 eval: n/a prob: n/a identity: 0.1017 startpos: 61
KAKFSIFSDIYNLAQKLVFIkkIWHMAVTlaQSLCFLGLLSSMSTLVDLpfVLEEKFGFN----------------------KLTVKLWITDMIKSLTLAYAIGGPILYLFLKIFDkwYIMVFLFVVQILAMTIIPVflEDGELKKSIESLADRVGFPLDKIFVIDGSKRSsaYFTGLPfkRIVLFDTLVNSNSTDEITAVLAHEIGHWQKNHIVNMVIFSQLHTFLIFSLfiIIGFMLFNDlhEYQADAYAKKL---GYKQNLCRALIDLQIKNLSTMNVdlYSSYHYSHPTLAERLTALD------------------------------------------
>2yptA_204 weight: 0.0189 score: 194.18 eval: 5.7e-22 prob: 99.88 identity: 0.1017 startpos: 75
--TFSFWSGLYSETEGtiLLFGGIPYLWRLSGriTQSLVfalFSALAGLPWSLYNTFVIEEKHGFNQ-QT-----LG----------FFMKDAIKKfcislkIGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFtpEGKLKEEIEVMAKSIDFPLT--KVYVVesHSNAYFYGF--KRIVLFDTLLEqcKNEEVLAVLGHALGHWKLGHTVKNIIISQMNSFLCFFLFAVLIGrvLSRRFEFQADAFAKKL-G--KAKDLYSALIKLNKDNLGfvSDWLFSMWHYSHPPLLERLQALKTM----------------------------------------
>5sytA_202 weight: 0.0187 score: 184.04 eval: 2.3e-20 prob: 99.86 identity: 0.1221 startpos: 67
--TFSFWSGLYSETEGTLilFGGIPYLWRlfyEITQSLVFLltLFstGLPWSLYNTFVIEEKHGFNQ-QT-----LG----------FFMKDAivTQCILlligGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFtpEGKLKEEIEVMAKSIDFPLTKVYVVEGSKRSSHSN-----KRIVLFDTLLEEYsnEEVLAVLGHELGHWKLGHTVKNIIISQMNSFLCFfpTLIGLltVLSRRFEFQADAFAKKLG---KAKDLYSALIKLNKDNLGfvSDWLFSMWHYSHPPLLERLQALKTMKQSGLEV---------------------------------
>4il3A_203 weight: 0.0185 score: 198.18 eval: 1.5e-22 prob: 99.89 identity: 0.1017 startpos: 62
-AKFSIFSDIYNLAQKLVFIkkIWHMAVTlvAQSLCFLGLLsmSTLVDLPLSYYSHFVLE---------EKFGFNKLTV-------KLWITDMIKSlaIGGPifPTDFLWYIMVFLFVVQILAMTIIPVFIMPLFNKFteDGELKKSIESLADRVGFPLD--KIFVIdsHSNAYFTGLpsKRIVLFDTLVNSNSTDEITAVLAHEIGHWQKNHIVNMVIFSQLHTfdLLTPlmQFIMSLISRTHEYQADAYAKKL-G--YKQNLCRALIDLQIKNLStnVDPLYSSYHYSHPTLAERLTALD------------------------------------------

Alignment cluster 1 [ RosettaCM constraints ]

T0994 Domain 1 Parse 1 Confidence: 0.25 Download Results Archive Download Domain Models

T0994 Domain 1 Parse 1 Confidence: 0.25